CDS

Accession Number TCMCG013C27675
gbkey CDS
Protein Id XP_006486599.1
Location join(288281..288325,288625..288695,288909..289008,289080..289187,289362..289478,289679..289829,290015..290262,290402..290572,290992..291068,291138..291255,291478..291561,291687..291782,291947..292048,292358..292426,292524..292619,292686..292793,294478..294591,294726..294809,295199..295327,295670..295868,295973..296116,296478..296521,296753..296836,296959..297027,297131..297207,297537..297606,297991..298140,298524..298589,298775..298919,299026..299090,299167..299232,299404..299497,299854..299890,300005..300062,300262..300372,300450..300517,301000..301066,301153..301221,301507..301599)
Gene LOC102615536
GeneID 102615536
Organism Citrus sinensis

Protein

Length 1287aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA225998
db_source XM_006486536.3
Definition NPC intracellular cholesterol transporter 1-like isoform X2 [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTCCTTTCTTGGTTTCTTCACTTATATTACTATTTTTCAGGTTATTCTTCTTGCATGTTTAGTGACTGCAGAGAAGACTGATACCCTTTTAATCAAGGATGTCACTTCTAGTGAAAGGCATTCTAAAGAATATTGTGCAATGTACGACATATGCGGAGAAAGGAGTGATGGAAAAGTTCTAAATTGCCCTTATGGTTCCCCTTCCGTGAAGCCTGATGAGCTGTTTTCTGCCAAAATCGAAAGCTTGTGTCCATCAATAAGTGGGAATGTTTGTTGTACAGAGACTCAATTTGAAACACTGAGGGCACAGGTTCAACAGGCTATACCTTTCCTTGTGGGTTGTCCAGCATGCTTGAGGAACTTTTTGAACTTATTTTGTGAGCTCTCATGCTCTCCTAATCAAAGCCAATTCATCAATGTGACTTCTGTCTCCGAGGTTAATGGCAATTTGACTGTGGATGGTATTGACTATTATGTAACCAGTACTTTTGGAGAAGAGCTTTATAACTCCTGTAAGGATGTAAAGTTTGGGACTATGAACACTCGGGCCATAGATTTCATTGGTGCTGGTGCTAAAAGCTTTAAAGAATGGTTTGCTTTTATCGGTCAGAAAGCACCTCCTGGATTTCCTGGTTCTCCATATGCCATAAACTTTAAGTTAAGCATTCCTGAGTCATCAGGATTGGAGCTTATGAATGTATCCACGTACTCATGTGGTGACACCTCCCTGGGCTGCTCCTGTGGTGACTGTCCTTTGTCACCTATGTGCTCTAGTTCTGAACCTCCTTCTCCCCCAAGGAAAGAAGCCTGCACAATTAGAATTGGGTCTCTTAAGGTTAAATGTGTTGAACTTTCGTTAGTGATTGCGTATGTTGTTTTGATTTCTACATTTTTTGGATGGGCTCTGTTTCAACGGACAAGAGAAAGGAGGATACCGCCATCTAGTGTTGAGCCATTGATAAAGTCCACAAGTGACAGTGGACCTGATTCTGGTATCATGGAGGAGGTAAATGCAAGGGATCTTCTACCGACCGAGGGGGGCGGGCTTTCTGTTGTTCAAGGATACATGTTGAGCTTTTACAGGACTTATGGAAGATGGGTTGCTGCGAATCCTGCTTTTGTGCTCTGTATGTCGTTAGCAATTGGTTTTGTGCTTTGTTTAGGGGTAATTCGTTTCAAGGTGGAGACGCGGCCAGAGAAGTTGTGGGTAGGTCCTGGGAGTAGGGCAGCGGGAGAGAAACAATTTTTTGACAGCCACCTTGCTCCCTTCTACAGAATTGAACAGCTAATATTAGCGACCTTACCTGATCCAAAGAATGGCAAGCAACCCAGTATTATCACAGAGGATAACTTCCAGTTGCTCTTTGAAATGCAAAAGAAGGTTGATGGAGTACGTGCTAATGATTCTGCCTCATTGGTATCCATAACTGACATTTGCTTGAAGCCTCTTGGCGAGGATTGTGCCAGTCAGAGTGTTCTGCAGTATTTCAAAATGGATCCTGAAAATTACGATTCCTATGGAGGCATTGAACATGCTGAGTATTGTTTTCAGCATTATGCCTCTTCAGACACATGTTTGAGTGCATTTAAGGCTCCTCTTGATCCAAGCACTGTCTTAGGAGGATTTTCCGGAAACAATTATTCTGAGGCTTCTGCCTTTATTATCACGTATCCTGTTAATAATGCAATTGATGAAACAAGCAAAGAGAACAGAAAGGCTGTGGCTTGGGAAAAGGCTTTCATTCAGTTGGCAAAGGAGGAGCTGCTACCAATGGTTCAGTCTAGCAACCTTACTCTTTCATTTTCATCAGAAAGTTCGCTTGAGGAAGAACTGAAAAGAGAAAGTACTGCAGATGTCGTCACCATAGTAGCAAGCTATCTTGTAATGTTTGCATATATTTCTGTGGCACTGGGAGACACACCTCGTTTTTCTTCTTTCTATGTCTCATCCAAGGTGTTGCTGGGCCTTTCAGGAGTTATCCTTGTTATGCTTTCTGTGCTTGGATCTGTTGGATTTTTCAGTGCCATTGGAGTTAAATCTACATTGATCATAATGGAAGTTATTCCTTTTCTTGTCTTAGCTGTTGGAGTGGATAACATGTGTATATTGGTTAATGCTGTAAAACGGCAACCGACGGAGTTAGTTCTAGAGACACGAATAAGCAATGCACTGGTTGAAGTTGGTCCTTCCATAACTCTAGCTAGTTTATCTGAGTTTCTGGCATTTGCTGTTGGAAGCTTCATCCCTATGCCAGCATGCCGTGTCTTCTCTATGTTTGCAGCCTTGGCTGTTTTACTCGACTTCTTTCTGCAAGTTACTGCCTTTGTTGCACTGATAGTTTTTGACTGCTTAAGAGCTGAGGATAACAGGATTGACTGTTTTCCATGCATAAAGATTCCTTCATCTGGTGGAGAATCTGATGAAGGCATCAACCAGAGATCCCCTGGATTGCTGGCTCGATATATGAAGGAAGTTCATGCACCCATTCTGGGACTTTGGGGAGTGAAAATGGTAGTTGTTTCTGTATTTCTTGCCTTCACTGTGGCAAGCATTGCTTTATCTACAAGGATTGAGGCTGGTTTGGAGCAACAGATTGTTCTTCCTCGGGACTCCTATCTTCAAGGGTATTTTGATAATACCACAGAGTATCTAAGAGTTGGTCCTCCATTATATTTTGTTGTTAAGGATTACAACTACAGCTCGGAATCAAGACATACAAACCAGTTGTGCTCCATCAGCCAGTGCGATTCAAACTCTCTTTTGAATGAGATATCGAGGGCATCTTCAATTCCAGAGTTAAGCTACATAGCCAAGCCTGCTGCTTCATGGCTTGATGACTTTCTTGTCTGGACCTCACCAGAGGCTTTTGGCTGCTGTCGGAAGTTTGTGAATGGTACTTATTGTCCTCCTGATGATCAGCCACCCTGCTGTTCACCTGATGAAGAACCCTGTGGTGTCAATGGAGTCTGCAAAGACTGTACAACGTGCTTTCGTCACTCAGATTTGGTTAACAATCGACCATCTACGGAGCAATTTAGGGAGAAGCTTCCATGGTTCCTAAACGCACTGCCATCTGCTGATTGTGCAAAAGGTGGCCATGGGGCCTACTCCACTAGTGTGGATCTAAATGGCTATGAAAGTGGTATTATACAAGCATCGGAGTTTCGCACTTTTCACACGCCACTGAACAAGCAGGGTGATTATGTTAATTCATTGCGAGCTGCACGGGAGTTCAGCTCAAGAATGTCCGATACCTTAAAGATCAATATTTTTCCATATTCGGTGTTCTATATCTTCTTTGAGCAATATCTGGATATTTGGAGGGTTGCTTTGATCAACATTGCTGTAGCACTTGGTGCTATATTTATTGTTTGTCTACTTATGACATCCAGTTTGTGGAGTTCAGCAATCATACTTGTTGTGTTGGTGATGATAGTCATTGATCTCTTGGGAGTTATGGCAATTCTGGGTATTCAGCTCAATGCAGTTTCTGTTGTAAACCTTATAATGTCAATAGGGATTGCTGTTGAGTTCTGTGTGCATCTAGTGCATGCTTTTCTGGTAAGCCATGGGAATCGGAACCAACGATCACAAAAGGCTCTGAGTACCATGGGAGCTTCCGTCTTCAGTGGAATTACACTCACAAAGCTTGTTGGAGTAATCGTGCTTTGCTTCGCCAGATCAGAAATTTTTGTGGTTTATTACTTCCAAATGTACCTGGCATTGGTTATTATTGGTTTCTTGCATGGACTTGTGTTTCTACCAGTGATATTGAGTCTGTTCGGTCCTCCATCGAGGCATATAATCATCGAGAAACAGCAAGCAGATGAACCATCTACTTCATCAAACTTGAGCTAA
Protein:  
MASFLGFFTYITIFQVILLACLVTAEKTDTLLIKDVTSSERHSKEYCAMYDICGERSDGKVLNCPYGSPSVKPDELFSAKIESLCPSISGNVCCTETQFETLRAQVQQAIPFLVGCPACLRNFLNLFCELSCSPNQSQFINVTSVSEVNGNLTVDGIDYYVTSTFGEELYNSCKDVKFGTMNTRAIDFIGAGAKSFKEWFAFIGQKAPPGFPGSPYAINFKLSIPESSGLELMNVSTYSCGDTSLGCSCGDCPLSPMCSSSEPPSPPRKEACTIRIGSLKVKCVELSLVIAYVVLISTFFGWALFQRTRERRIPPSSVEPLIKSTSDSGPDSGIMEEVNARDLLPTEGGGLSVVQGYMLSFYRTYGRWVAANPAFVLCMSLAIGFVLCLGVIRFKVETRPEKLWVGPGSRAAGEKQFFDSHLAPFYRIEQLILATLPDPKNGKQPSIITEDNFQLLFEMQKKVDGVRANDSASLVSITDICLKPLGEDCASQSVLQYFKMDPENYDSYGGIEHAEYCFQHYASSDTCLSAFKAPLDPSTVLGGFSGNNYSEASAFIITYPVNNAIDETSKENRKAVAWEKAFIQLAKEELLPMVQSSNLTLSFSSESSLEEELKRESTADVVTIVASYLVMFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKRQPTELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMFAALAVLLDFFLQVTAFVALIVFDCLRAEDNRIDCFPCIKIPSSGGESDEGINQRSPGLLARYMKEVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYCPPDDQPPCCSPDEEPCGVNGVCKDCTTCFRHSDLVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTLKINIFPYSVFYIFFEQYLDIWRVALINIAVALGAIFIVCLLMTSSLWSSAIILVVLVMIVIDLLGVMAILGIQLNAVSVVNLIMSIGIAVEFCVHLVHAFLVSHGNRNQRSQKALSTMGASVFSGITLTKLVGVIVLCFARSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLFGPPSRHIIIEKQQADEPSTSSNLS